NanoLSI Papers
Articles
- Bednarska J., Novak P., Korchev Y., Rorsman P., Tarasov A.I., Shevchuk A.
“Release of insulin granules by simultaneous, high-speed correlative SICM-FCM”
Journal of Microscopy, 282(1), 21-29
DOI: 10.1111/jmi.12972 - Matusovsky O.S., Kodera N., MacEachen C., Ando T., Cheng Y.-S., Rassier D.E.
“Millisecond Conformational Dynamics of Skeletal Myosin II Power Stroke Studied by High-Speed Atomic Force Microscopy”
ACS Nano, 15(2), 2229-2239
DOI: 10.1021/acsnano.0c06820 - Ikai T., Kurake T., Okuda S., Maeda K., Yashima E.
“Racemic Monomer-Based One-Handed Helical Polymer Recognizes Enantiomers through Auto-Evolution of Its Helical Handedness Excess”
Angewandte Chemie – International Edition, 60(9), 4625-4632
DOI: 10.1002/anie.202014946 - Imai H., Uchiumi T., Kodera N.
“Direct visualization of translational GTPase factor pool formed around the archaeal ribosomal P-stalk by high-speed AFM”
Proceedings of the National Academy of Sciences of the United States of America, 117(51), 32386-32394
DOI: 10.1073/pnas.2018975117 - Hosaka Y., Komura S., Mikhailov A.S.
“Mechanochemical enzymes and protein machines as hydrodynamic force dipoles: The active dimer model”
Soft Matter, 16(47), 10734-10749
DOI: 10.1039/d0sm01138j - Kezilebieke S., Huda M.N., Vaňo V., Aapro M., Ganguli S.C., Silveira O.J., Głodzik S., Foster A.S., Ojanen T., Liljeroth P.
“Topological superconductivity in a van der Waals heterostructure”
Nature, 588(7838), 424-428
DOI: 10.1038/s41586-020-2989-y - Strilets D., Fa S., Hardiagon A., Baaden M., Ogoshi T., Barboiu M.
“Biomimetic Approach for Highly Selective Artificial Water Channels Based on Tubular Pillar[5]arene Dimers”
Angewandte Chemie – International Edition, 59(51), 23213-23219
DOI: 10.1002/anie.202009219 - Jager M.O.J., Ranawat Y.S., Canova F.F., Morooka E.V., Foster A.S.
“Efficient Machine-Learning-Aided Screening of Hydrogen Adsorption on Bimetallic Nanoclusters”
ACS Combinatorial Science, 22(12), 768–781
DOI: 10.1021/acscombsci.0c00102 - Ueno M., Tomita T., Arakawa H., Kakuta T., Yamagishi T.-A., Terakawa J., Daikoku T., Horike S.-I., Si S., Kurayoshi K., Ito C., Kasahara A., Tadokoro Y., Kobayashi M., Fukuwatari T., Tamai I., Hirao A., Ogoshi T.
“Pillar[6]arene acts as a biosensor for quantitative detection of a vitamin metabolite in crude biological samples”
Communications Chemistry, 3(1), 183
DOI: 10.1038/s42004-020-00430-w - Shigyou K., Sun L., Yajima R., Takigaura S., Tajima M., Furusho H., Kikuchi Y., Miyazawa K., Fukuma T., Taoka A., Ando T., Watanabe S.
“Geometrical Characterization of Glass Nanopipettes with Sub-10 nm Pore Diameter by Transmission Electron Microscopy”
Analytical Chemistry, 92(23), 15388-15393
DOI: 10.1021/acs.analchem.0c02884 - Nakayama M., Hong C.P., Oshima H., Sakai E., Kim S.-J., Oshima M.
“Loss of wild-type p53 promotes mutant p53-driven metastasis through acquisition of survival and tumor-initiating properties”
Nature Communications, 11(1), 2333
DOI: 10.1038/s41467-020-16245-1 - Amai K., Fukami T., Ichida H., Watanabe A., Nakano M., Watanabe K., Nakajima M.
“Quantitative analysis of mRNA expression levels of aldo-keto reductase and short-chain dehydrogenase/reductase isoforms in human livers”
Drug Metabolism and Pharmacokinetics, 35(6), 539-547
DOI: 10.1016/j.dmpk.2020.08.004 - Sakai K., Nishiuchi T., Tange S., Suzuki Y., Yano S., Terashima M., Suzuki T., Matsumoto K.
“Proteasomal degradation of polycomb-group protein CBX6 confers MMP-2 expression essential for mesothelioma invasion”
Scientific Reports, 10(1), 16678
DOI: 10.1038/s41598-020-72448-y - Penedo M., Yurtsever A., Miyazawa K., Furusho H., Ishii K.-A., Fukuma T.
“Photothermal excitation efficiency enhancement of cantilevers by electron beam deposition of amorphous carbon thin films”
Scientific Reports, 10(1), 17436
DOI: 10.1038/s41598-020-74433-x - Hirata K., Igarashi T., Suzuki K., Miyazawa K., Fukuma T.
“Wideband Magnetic Excitation System for Atomic Force Microscopy Cantilevers with Megahertz-Order Resonance Frequency”
Scientific Reports, 10(1), 9133
DOI: 10.1038/s41598-020-65980-4 - Liu W., Nakano M., Nakanishi T., Nakajima M., Tamai I.
“Post-transcriptional regulation of OATP2B1 transporter by a microRNA, miR-24”
Drug Metabolism and Pharmacokinetics, 35(6), 515-521
DOI: 10.1016/j.dmpk.2020.07.007 - Wang R., Yamada T., Kita K., Taniguchi H., Arai S., Fukuda K., Terashima M., Ishimura A., Nishiyama A., Tanimoto A., Takeuchi S., Ohtsubo K., Yamashita K., Yamano T., Yoshimura A., Takayama K., Kaira K., Taniguchi Y., Atagi S., Uehara H., Hanayama R., Matsumoto I., Han X., Matsumoto K., Wang W., Suzuki T., Yano S.
“Transient IGF-1R inhibition combined with osimertinib eradicates AXL-low expressing EGFR mutated lung cancer”
Nature Communications, 11(1), 4607
DOI: 10.1038/s41467-019-14025-0 - Tatebe H., Lim C.T., Konno H., Shiozaki K., Shinohara A., Uchihashi T., Furukohri A.
“Rad50 zinc hook functions as a constitutive dimerization module interchangeable with SMC hinge”
Nature Communications, 11(1), 370
DOI: 10.1038/s41467-019-14025-0 - Bolidong D., Domoto T., Uehara M., Sabit H., Okumura T., Endo Y., Nakada M., Ninomiya I., Miyashita T., Wong R.W., Minamoto T.
“Potential therapeutic effect of targeting glycogen synthase kinase 3β in esophageal squamous cell carcinoma”
Scientific Reports, 10(1), 11807
DOI: 10.1038/s41598-020-68713-9 - Kubo S., Kato S., Nakamura K., Kodera N., Takada S.
“Resolving the data asynchronicity in high-speed atomic force microscopy measurement via the Kalman Smoother”
Scientific Reports, 10(1), 18393
DOI: 10.1038/s41598-020-75463-1 - Saifullah, Sakari M., Suzuki T., Yano S., Tsukahara T.
“Effective rna knockdown using crispr-cas13a and molecular targeting of the eml4-alk transcript in h3122 lung cancer cells”
International Journal of Molecular Sciences, 21(23), 8904, 1-17
DOI: 10.3390/ijms21238904 - Kuroda K., Komori T., Ishibashi K., Uto T., Kobayashi I., Kadokawa R., Kato Y., Ninomiya K., Takahashi K., Hirata E.
“Non-aqueous, zwitterionic solvent as an alternative for dimethyl sulfoxide in the life sciences”
Communications Chemistry, 3(1), 163
DOI: 10.1038/s42004-020-00409-7 - Kondrychyn I., Kelly D.J., Carretero N.T., Nomori A., Kato K., Chong J., Nakajima H., Okuda S., Mochizuki N., Phng L.-K.
“Marcksl1 modulates endothelial cell mechanoresponse to haemodynamic forces to control blood vessel shape and size”
Nature Communications, 11(1), 5476
DOI: 10.1038/s41467-020-19308-5 - Ichikawa T., Stuckenholz C., Davidson L.A.
“Non-junctional role of Cadherin3 in cell migration and contact inhibition of locomotion via domain-dependent, opposing regulation of Rac1”
Scientific Reports, 10(1), 17326
DOI: 10.1038/s41598-020-73862-y - Zhang P., Liu X., Liu P., Wang F., Ariyama H., Ando T., Lin J., Wang L., Hu J., Li B., Fan C.
“Capturing transient antibody conformations with DNA origami epitopes”
Nature Communications, 11(1), 3114
DOI: 10.1038/s41467-020-16949-4 - Qu M., Watanabe-Nakayama T., Sun S., Umeda K., Guo X., Liu Y., Ando T., Yang Q.
“High-Speed Atomic Force Microscopy Reveals Factors Affecting the Processivity of Chitinases during Interfacial Enzymatic Hydrolysis of Crystalline Chitin”
ACS Catalysis, 10(22), 13606–13615
DOI: 10.1021/acscatal.0c02751 - Kosaka T., Teduka Y., Ogura T., Zhou Y., Hisatomi T., Nishiyama H., Domen K., Takahashi Y., Onishi H.
“Transient kinetics of O2evolution in photocatalytic water-splitting reaction”
ACS Catalysis, 10(22), 13159–13164
DOI: 10.1021/acscatal.0c04115 - Amyot R., Flechsig H.
“BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics”
PLoS Computational Biology, 16(11), e1008444
DOI: 10.1371/journal.pcbi.1008444 - Fa S., Egami K., Adachi K., Kato K., Ogoshi T.
“Sequential Chiral Induction and Regulator-Assisted Chiral Memory of Pillar[5]arenes”
Angewandte Chemie – International Edition, 59(46), 20353-20356
DOI: 10.1002/anie.202010050 - Walters C.M., Adair K.R., Hamad W.Y., MacLachlan M.J.
“Synthesis of Chiral Nematic Mesoporous Metal and Metal Oxide Nanocomposites and their Use as Heterogeneous Catalysts”
European Journal of Inorganic Chemistry
DOI: 10.1002/ejic.202000673 - Kawasaki Y., Ariyama H., Motomura H., Fujinami D., Noshiro D., Ando T., Kohda D.
“Two-State Exchange Dynamics in Membrane-Embedded Oligosaccharyltransferase Observed in Real-Time by High-Speed AFM”
Journal of Molecular Biology, 432(22), 5951-5965
DOI: 10.1016/j.jmb.2020.09.017 - Ogoshi T., Hamada Y., Sueto R., Kojima R., Sakakibara F., Nagata Y., Sakata Y., Akine S., Ono T., Kakuta T., Yamagishi T.-A.
“Vapoluminescence Behavior Triggered by Crystal-State Complexation between Host Crystals and Guest Vapors Exhibiting No Visible Fluorescence”
Crystal Growth and Design, 20(11), 7087-7092
DOI: 10.1021/acs.cgd.0c00982 - Ueta T., Kojima K., Hino T., Shibata M., Nagano S., Sudo Y.
“Applicability of Styrene-Maleic Acid Copolymer for Two Microbial Rhodopsins, RxR and HsSRI”
Biophysical Journal, 119(9), 1760-1770
DOI: 10.1016/j.bpj.2020.09.026 - Ren R., Wang X., Cai S., Zhang Y., Korchev Y., Ivanov A.P., Edel J.B.
“Selective Sensing of Proteins Using Aptamer Functionalized Nanopore Extended Field-Effect Transistors”
Small Methods, 4(11), 2000356
DOI: 10.1002/smtd.202000356 - Han X., Wang M., Liu C., Trush O., Takayama R., Akiyama T., Naito T., Tomomizu T., Imamura K., Sato M.
“DWnt4 and DWnt10 Regulate Morphogenesis and Arrangement of Columnar Units via Fz2/PCP Signaling in the Drosophila Brain”
Cell Reports, 33(4), 108305
DOI: 10.1016/j.celrep.2020.108305 - Toda S., McKeithan W.L., Hakkinen T.J., Lopez P., Klein O.D., Lim W.A.
“Engineering synthetic morphogen systems that can program multicellular patterning”
Science, 370(6514), 327-331
DOI: 10.1126/science.abc0033 - Mohamed M.S., Hazawa M., Kobayashi A., Guillaud L., Watanabe-Nakayama T., Nakayama M., Wang H., Kodera N., Oshima M., Ando T., Wong R.W.
“Spatiotemporally tracking of nano-biofilaments inside the nuclear pore complex core”
Biomaterials, 256, 120198
DOI: 10.1016/j.biomaterials.2020.120198 - Takizawa M., Nakano M., Fukami T., Nakajima M.
“Decrease in ADAR1 expression by exposure to cigarette smoke enhances susceptibility to oxidative stress”
Toxicology Letters, 331, 22-32
DOI: 10.1016/j.toxlet.2020.05.019 - Nishiyama A., Takeuchi S., Adachi Y., Otani S., Tanimoto A., Sasaki M., Matsumoto S., Goto K., Yano S.
“MET amplification results in heterogeneous responses to osimertinib in EGFR-mutant lung cancer treated with erlotinib”
Cancer Science, 111(10), 3813-3823
DOI: 10.1111/cas.14593 - Kondo N., Hikida M., Nakada M., Sakurai Y., Hirata E., Takeno S., Suzuki M.
“Glioma stem-like cells can be targeted in boron neutron capture therapy with boronophenylalanine”
Cancers, 12(10), 3040, 1-13
DOI: 10.3390/cancers12103040 - Umeda K., Kobayashi K., Minato T., Yamada H.
“Molecular-Scale Solvation Structures of Ionic Liquids on a Heterogeneously Charged Surface”
The journal of physical chemistry letters, 11(19), 8094-8099
DOI: 10.1021/acs.jpclett.0c02356 - Hirata E., Ishibashi K., Kohsaka S., Shinjo K., Kojima S., Kondo Y., Mano H., Yano S., Kiyokawa E., Sahai E.
“The Brain Microenvironment Induces DNMT1 Suppression and Indolence of Metastatic Cancer Cells”
iScience, 23(9), 101480
DOI: 10.1016/j.isci.2020.101480 - Ogoshi T., Kotera D., Fa S., Nishida S., Kakuta T., Yamagishi T.-a., Brouwer A.M.
“A light-operated pillar[6]arene-based molecular shuttle”
Chemical Communications, 56(74), 10871-10874
DOI: 10.1039/d0cc03945d - Sun K., Nishiuchi T., Sahara K., Kubo T., Foster A.S., Kawai S.
“Low-Temperature Removal of Dissociated Bromine by Silicon Atoms for an On-Surface Ullmann Reaction”
Journal of Physical Chemistry C, 124(36), 19675-19680
DOI: 10.1021/acs.jpcc.0c06188 - Lim K., Kodera N., Wang H., Mohamed M.S., Hazawa M., Kobayashi A., Yoshida T., Hanayama R., Yano S., Ando T., Wong R.W.
“High-Speed AFM Reveals Molecular Dynamics of Human Influenza A Hemagglutinin and Its Interaction with Exosomes”
Nano letters, 20(9), 6320-6328
DOI: 10.1021/acs.nanolett.0c01755 - Yang L., Igarashi T., Cao Y., Holmström E., Hirata K., Asakawa H., Ohno T., Fukuma T., Foster A.S.
“Photo-sensitive 2D Arrangement of-OH/H2O on Brookite TiO2(210)”
Journal of Physical Chemistry C, 124(35), 19091-19100
DOI: 10.1021/acs.jpcc.0c05151 - Tsutsui T., Kawahara H., Kimura R., Dong Y., Jiapaer S., Sabit H., Zhang J., Yoshida T., Nakada M., Hanayama R.
“Glioma-derived extracellular vesicles promote tumor progression by conveying WT1”
Carcinogenesis, 41(9), 1238-1245
DOI: 10.1093/carcin/bgaa052 - Zhong C., Mizushima D., Hirata K., Ishii Y., Kurushima K., Kato D., Nakajima H., Mori S., Suzuki H., Ogawa K., Abe R., Fukuma T., Kageyama H.
“Domain observation in the visible-light photocatalyst Bi4NbO8Br with the layered perovskite structure”
Applied Physics Express, 13(9), 91004
DOI: 10.35848/1882-0786/abb287 - Xu G., Wang K., Dong X., Yang L., Jiang H., Wang Q., Ding W.
“Effects of Titanium Addition on the Microstructural and Mechanical Property Evolution of FeCrB Alloys”
Metallurgical and Materials Transactions A: Physical Metallurgy and Materials Science, 51, 4610-4622
DOI: 10.1007/s11661-020-05899-7 - Bednarska J., Pelchen-Matthews A., Novak P., Burden J.J., Summers P.A., Kuimova M.K., Korchev Y., Marsh M., Shevchuk A.
“Rapid formation of human immunodeficiency virus-like particles”
Proceedings of the National Academy of Sciences of the United States of America, 117(35), 21637-21646
DOI: 10.1073/pnas.2008156117 - Watanabe-Nakayama T., Nawa M., Konno H., Kodera N., Ando T., Teplow D.B., Ono K.
“Self- and Cross-Seeding on α-Synuclein Fibril Growth Kinetics and Structure Observed by High-Speed Atomic Force Microscopy”
ACS nano, 14(8), 9979-9989
DOI: 10.1021/acsnano.0c03074 - Miyairi M., Taniguchi T., Nishimura T., Maeda K.
“Revisiting the Polymerization of Diphenylacetylenes with Tungsten(VI) Chloride and Tetraphenyltin: An Alternative Mechanism by a Metathesis Catalytic System”
Angewandte Chemie – International Edition, 59(35), 14772-14780
DOI: 10.1002/anie.202005964 - Takahashi Y., Yamashita T., Takamatsu D., Kumatani A., Fukuma T.
“Nanoscale kinetic imaging of lithium ion secondary battery materials using scanning electrochemical cell microscopy”
Chemical communications, 56, 9324-9327
DOI: 10.1039/d0cc02865g - Tsutsui T., Catti L., Yoza K., Yoshizawa M.
“An atropisomeric M2L4cage mixture displaying guest-induced convergence and strong guest emission in water”
Chemical Science, 11(31), 8145-8150
DOI: 10.1039/d0sc03223a - Suematsu Y., Tsai Y.A., Takeoka S., Franz C.M., Arai S., Fujie T.
“Ultra-thin, transparent, porous substrates as 3D culture scaffolds for engineering ASC spheroids for high-magnification imaging”
Journal of materials chemistry. B, 8(31), 6999-7008
DOI: 10.1039/d0tb00723d - Morita F., Nakakubo K., Yunoshita K., Endo M., Biswas F.B., Nishimura T., Mashio A.S., Hasegawa H., Taniguchi T., Maeda K.
“Dithiocarbamate-modified cellulose-based sorbents with high storage stability for selective removal of arsenite and hazardous heavy metals”
RSC Advances, 10(50), 30238-30244
DOI: 10.1039/d0ra05573e - Mishra S., Mondal A.K., Smolinsky E.Z.B., Naaman R., Maeda K., Nishimura T., Taniguchi T., Yoshida T., Takayama K., Yashima E.
“Spin Filtering Along Chiral Polymers”
Angewandte Chemie – International Edition, 59(34), 14671-14676
DOI: 10.1002/anie.202006570 - Sakata Y., Ogura T., Akine S.
“Efficient formation of [3]pseudorotaxane based on cooperative complexation of dibenzo-24-crown-8 with diphenylviologen axle”
Chemical communications, 56, 8735-8738
DOI: 10.1039/d0cc03131c - Nagata Y., Suzuki M., Shimada Y., Sengoku H., Nishida S., Kakuta T., Yamagishi T.-A., Suginome M., Ogoshi T.
“Holding of planar chirality of pillar[5]arene by kinetic trapping using host-guest interactions with achiral guest solvents”
Chemical Communications, 56, 8424-8427
DOI: 10.1039/d0cc03413d - Fukuma T.
“Subnanometer-scale imaging of nanobio-interfaces by frequency modulation atomic force microscopy”
Biochemical Society transactions, 48(4), 1675-1682
DOI: 10.1042/BST20200155 - Thi Thanh Dang N., Nguyen T.-D., Lizundia E., Quoc Le T., MacLachlan M.J.
“Biomimetic Mesoporous Cobalt Ferrite/Carbon Nanoflake Helices for Freestanding Lithium-Ion Battery Anodes”
ChemistrySelect, 5(27), 8207-8217
DOI: 10.1002/slct.202002152 - Concellón A., Romero P., Marcos M., Barberá J., Sánchez-Somolinos C., Mizobata M., Ogoshi T., Serrano J.L., Del Barrio J.
“Coumarin-Containing Pillar[5]arenes as Multifunctional Liquid Crystal Macrocycles”
Journal of Organic Chemistry, 85(14), 8944-8951
DOI: 10.1021/acs.joc.0c00852 - Dobashi H., Catti L., Tanaka Y., Akita M., Yoshizawa M.
“N-Doping of Polyaromatic Capsules: Small Cavity Modification Leads to Large Change in Host–Guest Interactions”
Angewandte Chemie – International Edition, 59(29), 11881-11885
DOI: 10.1002/anie.202004168 - Gudzenko T., Franz C.M.
“Controlling Fibronectin Fibrillogenesis Using Visible Light”
Frontiers in Molecular Biosciences, 7, 149
DOI: 10.3389/fmolb.2020.00149 - Nobeyama T., Shigyou K., Nakatsuji H., Sugiyama H., Komura N., Ando H., Hamada T., Murakami T.
“Control of Lipid Bilayer Phases of Cell-Sized Liposomes by Surface-Engineered Plasmonic Nanoparticles”
Langmuir, 36(26), 7741-7746
DOI: 10.1021/acs.langmuir.0c00049 - Nozaki M., Hirose D., Maeda K.
“Synthesis of a poly(diphenylacetylene) bearing optically active anilide pendants and its application to a chiral stationary phase for high-performance liquid chromatography”
Journal of Chromatography A, 1622, 461173
DOI: 10.1016/j.chroma.2020.461173 - Fukuda K., Takeuchi S., Arai S., Kita K., Tanimoto A., Nishiyama A., Yano S.
“Glycogen synthase kinase-3 inhibition overcomes epithelial-mesenchymal transition-associated resistance to osimertinib in EGFR-mutant lung cancer”
Cancer Science, 111(7), 2374-2384
DOI: 10.1111/cas.14454 - Nakamura K., Li Q.-Q., Krejčí O., Foster A.S., Sun K., Kawai S., Ito S.
“On-Surface Synthesis of a π-Extended Diaza[8]circulene”
Journal of the American Chemical Society, 142(26), 11363-11369
DOI: 10.1021/jacs.0c02534 - Miyazawa K., Tracey J., Reischl B., Spijker P., Foster A.S., Rohl A.L., Fukuma T.
“Tip dependence of three-dimensional scanning force microscopy images of calcite-water interfaces investigated by simulation and experiments”
Nanoscale, 12(24), 12856-12868
DOI: 10.1039/d0nr02043e - Zhan J., Lin M., Arai S., Yang W.W., Sou K., Sato H.
“Electrochemical System Encapsulated by Nanoscale Liposomes Enabling On-Demand Triggering of Electroless Deposition at Selected Areas”
ACS Applied Nano Materials, 3(6), 5098-5106
DOI: 10.1021/acsanm.0c00366 - Soto M.A., Carta V., Andrews R.J., Chaudhry M.T., MacLachlan M.J.
“Structural Elucidation of Selective Solvatochromism in a Responsive-at-metal Cyclometalated Platinum(II) Complex”
Angewandte Chemie – International Edition
DOI: 10.1002/anie.202002646 - Sakata Y., Okada M., Tamiya M., Akine S.
“Post-Metalation Modification of a Macrocyclic Dicobalt(III) Metallohost by Site-Selective Ligand Exchange for Guest Recognition Control”
Chemistry – A European Journal, 26(34), 7595-7601
DOI: 10.1002/chem.202001072 - Vaneev A.N., Gorelkin P.V., Garanina A.S., Lopatukhina H.V., Vodopyanov S.S., Alova A.V., Ryabaya O.O., Akasov R.A., Zhang Y., Novak P., Salikhov S.V., Abakumov M.A., Takahashi Y., Edwards C.R.W., Klyachko N.L., Majouga A.G., Korchev Y.E., Erofeev A.S.
“In Vitro and in Vivo Electrochemical Measurement of Reactive Oxygen Species after Treatment with Anticancer Drugs”
Analytical Chemistry, 92(12), 8010-8014
DOI: 10.1021/acs.analchem.0c01256 - Fa S., Sakata Y., Akine S., Ogoshi T.
“Non-Covalent Interactions Enable the Length-Controlled Generation of Discrete Tubes Capable of Guest Exchange”
Angewandte Chemie – International Edition, 59(24), 9309-9313
DOI: 10.1002/anie.201916515 - Umitsu M., Sakai K., Tamura-Kawakami K., Matsumoto K., Takagi J.
“The constitutive high-affinity Met-binding site in the kringle domain is dispensable for the signalling activity of hepatocyte growth factor”
Journal of biochemistry, 167(6), 577-586
DOI: 10.1093/jb/mvaa006 - Ikai T., Mizumoto K., Ishidate R., Kitzmann W.R., Ikeda R., Yokota C., Maeda K., Yashima E.
“Catalytic one-handed helix-induction and memory of amphiphilic poly(biphenylylacetylene)s in water”
Giant, 2, 100016
DOI: 10.1016/j.giant.2020.100016 - Taniguchi T., Yoshida T., Echizen K., Takayama K., Nishimura T., Maeda K.
“Facile and Versatile Synthesis of End-Functionalized Poly(phenylacetylene)s: A Multicomponent Catalytic System for Well-Controlled Living Polymerization of Phenylacetylenes”
Angewandte Chemie – International Edition, 59(22), 8670-8680
DOI: 10.1002/anie.202000361 - Okuda S., Fujimoto K.
“A Mechanical Instability in Planar Epithelial Monolayers Leads to Cell Extrusion”
Biophysical Journal, 118, 1-12
DOI: 10.1016/j.bpj.2020.03.028 - Lim K.S., Ern Yong Z.W., Wang H., Tan T.Z., Huang R.Y.-J., Yamamoto D., Inaki N., Hazawa M., Wong R.W., Oshima H., Oshima M., Ito Y., Chih-Cheng Voon X.D.
“Inflammatory and mitogenic signals drive interleukin 23 subunit alpha (IL23A) secretion independent of IL12B in intestinal epithelial cells”
Journal of Biological Chemistry, 295(19), 6387-6400
DOI: 10.1074/jbc.RA120.012943 - Ondo K., Arakawa H., Nakano M., Fukami T., Nakajima M.
“SLC35B1 significantly contributes to the uptake of UDPGA into the endoplasmic reticulum for glucuronidation catalyzed by UDP-glucuronosyltransferases”
Biochemical Pharmacology, 175, 113916
DOI: 10.1016/j.bcp.2020.113916 - Shimizu M., Fukami T., Taniguchi T., Nomura Y., Nakajima M.
“A Novel Systematic Approach for Selection of Prodrugs Designed to Improve Oral Absorption”
Journal of Pharmaceutical Sciences
DOI: 10.1016/j.xphs.2020.01.028 - Cao Y., Wang P.-X., D’Acierno F., Hamad W.Y., Michal C.A., MacLachlan M.J.
“Tunable Diffraction Gratings from Biosourced Lyotropic Liquid Crystals”
Advanced Materials, 142(9), 4400-4410
DOI: 10.1002/adma.201907376 - Ono K., Mizushima Y., Furuya M., Kunihisa R., Tsuchiya N., Fukuma T., Iwata A., Matsuki A.
“Direct measurement of adhesion force of individual aerosol particles by atomic force microscopy”
Atmosphere, 11(5), 489
DOI: 10.3390/ATMOS11050489 - Bachmann M., Schäfer M., Mykuliak V.V., Ripamonti M., Heiser L., Weißenbruch K., Krübel S., Franz C.M., Hytönen V.P., Wehrle-Haller B., Bastmeyer M.
“Induction of ligand promiscuity of αVβ3 integrin by mechanical force”
Journal of cell science, 133(9)
DOI: 10.1242/jcs.242404 - Arai S., Takeuchi S., Fukuda K., Taniguchi H., Nishiyama A., Tanimoto A., Satouchi M., Yamashita K., Ohtsubo K., Nanjo S., Kumagai T., Katayama R., Nishio M., Zheng M.-M., Wu Y.-L., Nishihara H., Yamamoto T., Nakada M., Yano S.
“Osimertinib Overcomes Alectinib Resistance Caused by Amphiregulin in a Leptomeningeal Carcinomatosis Model of ALK-Rearranged Lung Cancer”
Journal of Thoracic Oncology
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Journal of the American Chemical Society, 142(16), 7668-7682
DOI: 10.1021/jacs.0c02542 - Wada K., Kakuta T., Yamagishi T.-A., Ogoshi T.
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Chemical Communications, 56(31), 4344-4347
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Biochemistry, 59(15), 1455-1464
DOI: 10.1021/acs.biochem.0c00075 - Manabe Y., Wada K., Baba Y., Yoneda T., Ogoshi T., Inokuma Y.
“Supramolecular Conformational Control of Aliphatic Oligoketones by Rotaxane Formation”
Organic Letters, 22(8) 3224-3228
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“Chiral Monolayers with Achiral Tetrapod Molecules on Highly Oriented Pyrolytic Graphite”
Journal of Physical Chemistry C, 124(14), 7760-7767
DOI: 10.1021/acs.jpcc.9b11246 - Konno H., Watanabe-Nakayama T., Uchihashi T., Okuda M., Zhu L., Kodera N., Kikuchi Y., Ando T., Taguchi H.
“Dynamics of oligomer and amyloid fibril formation by yeast prion Sup35 observed by high-speed atomic force microscopy”
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DOI: 10.1073/pnas.1916452117 - Ranjbar D., Raeiszadeh M., Lewis L., MacLachlan M.J., Hatzikiriakos S.G.
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DOI: 10.1007/s10570-020-03021-z - Kakuta T., Nakanishi R., Ogoshi T., Yamagishi T.-A.
“Halogen-sensitive solvatochromism based on a phenolic polymer of tetraphenylethene”
RSC Advances, 10(21), 12695-12698
DOI: 10.1039/d0ra02055a - Nonaka S., Salim E., Kamiya K., Hori A., Nainu F., Asri R.M., Masyita A., Nishiuchi T., Takeuchi S., Kodera N., Kuraishi T.
“Molecular and Functional Analysis of Pore-Forming Toxin Monalysin From Entomopathogenic Bacterium Pseudomonas entomophila”
Frontiers in Immunology, 11, 520
DOI: 10.3389/fimmu.2020.00520 - Kutz A., Rahman M.T., Haapasilta V., Venturini C., Bechstein R., Gordon A., Foster A.S., Kühnle A.
“Impact of the reaction pathway on the final product in on-surface synthesis”
Physical Chemistry Chemical Physics, 22(11), 6109-6114
DOI: 10.1039/c9cp06044h - Zhang D., Soto M.A., Lewis L., Hamad W.Y., MacLachlan M.J.
“Host–Guest Chemistry Within Cellulose Nanocrystal Gel Receptors”
Angewandte Chemie – International Edition, 59(12), 4705-4710
DOI: 10.1002/anie.201913030 - Walters C.M., Boott C.E., Nguyen T.-D., Hamad W.Y., Maclachlan M.J.
“Iridescent cellulose nanocrystal films modified with hydroxypropyl cellulose”
Biomacromolecules, 21(3), 1295-1302
DOI: 10.1021/acs.biomac.0c00056 - Foster W., Miyazawa K., Fukuma T., Kusumaatmaja H., Voïtchovsky K.
“Self-assembly of small molecules at hydrophobic interfaces using group effect”
Nanoscale, 12(9), 5452-5462
DOI: 10.1039/c9nr09505e - Takahashi K., Shimoi M., Watanabe T., Maeda K., Geib S.J., Curran D.P., Taniguchi T.
“Revisiting Polyfluoroarenes as Radical Acceptors: Radical C-F Bond Borylation of Polyfluoroarenes with N-Heterocyclic Carbene Boranes and Synthesis of Borane-Containing Liquid Crystals”
Organic Letters, 22(5), 2054-2059
DOI: 10.1021/acs.orglett.0c00481 - Yasuda S., Tamura K., Terasawa T.-O., Yano M., Nakajima H., Morimoto T., Okazaki T., Agari R., Takahashi Y., Kato M., Yagi I., Asaoka H.
“Confinement of Hydrogen Molecules at Graphene-Metal Interface by Electrochemical Hydrogen Evolution Reaction”
Journal of Physical Chemistry C, 124(9), 5300-5307
DOI: 10.1021/acs.jpcc.0c00995 - Merget S., Catti L., Piccini G., Tiefenbacher K.
“Requirements for Terpene Cyclizations inside the Supramolecular Resorcinarene Capsule: Bound Water and Its Protonation Determine the Catalytic Activity”
Journal of the American Chemical Society, 142(9), 4400-4410
DOI: 10.1021/jacs.9b13239 - Greciano E.E., Rodríguez R., Maeda K., Sánchez L.
“Disclosing chirality in consecutive supramolecular polymerizations: Chiral induction by light in: N-annulated perylenetetracarboxamides”
Chemical Communications, 56(15), 2244-2247
DOI: 10.1039/c9cc09687f - Umeda K., Kobayashi K., Minato T., Yamada H.
“Atomic-Scale Three-Dimensional Local Solvation Structures of Ionic Liquids”
Journal of Physical Chemistry Letters, 11(4), 1343-1348
DOI: 10.1021/acs.jpclett.9b03874 - Tan S.H., Swathi Y., Tan S., Goh J., Seishima R., Murakami K., Oshima M., Tsuji T., Phuah P., Tan L.T., Wong E., Fatehullah A., Sheng T., Ho S.W.T., Grabsch H.I., Srivastava S., Teh M., Denil S.L.I.J., Mustafah S., Tan P., Shabbir A., So J., Yeoh K.G., Barker N.
“AQP5 enriches for stem cells and cancer origins in the distal stomach”
Nature, 578, 437-443
DOI: 10.1038/s41586-020-1973-x - Fujioka Y., Alam J.M., Noshiro D., Mouri K., Ando T., Okada Y., May A.I., Knorr R.L., Suzuki K., Ohsumi Y., Noda N.N.
“Phase separation organizes the site of autophagosome formation”
Nature, 578, 301-305
DOI: 10.1038/s41586-020-1977-6 - Ikai T., Ishidate R., Inoue K., Kaygisiz K., Maeda K., Yashima E.
“Chiral/Achiral Copolymers of Biphenylylacetylenes Bearing Various Substituents: Chiral Amplification through Copolymerization, Followed by Enhancement/Inversion and Memory of the Macromolecular Helicity”
Macromolecules, 53(3), 973-981
DOI: 10.1021/acs.macromol.9b02727 - Lim K.S., Mohamed M.S., Wang H., Hartono, Hazawa M., Kobayashi A., Voon D.C.-C., Kodera N., Ando T., Wong R.W.
“Direct visualization of avian influenza H5N1 hemagglutinin precursor and its conformational change by high-speed atomic force microscopy”
Biochimica et Biophysica Acta – General Subjects, 1864(2), 129313
DOI: 10.1016/j.bbagen.2019.02.015 - Umakoshi T., Fukuda S., Iino R., Uchihashi T., Ando T.
“High-speed near-field fluorescence microscopy combined with high-speed atomic force microscopy for biological studies”
Biochimica et Biophysica Acta – General Subjects, 1864(2), 129325
DOI: 10.1016/j.bbagen.2019.03.011 - Himanen L., Jäger M.O.J., Morooka E.V., Federici Canova F., Ranawat Y.S., Gao D.Z., Rinke P., Foster A.S.
“DScribe: Library of descriptors for machine learning in materials science”
Computer Physics Communications, 247, 106949
DOI: 10.1016/j.cpc.2019.106949 - Nozato Y., Takami Y., Yamamoto K., Nagasawa M., Nozato S., Imaizumi Y., Takeshita H., Wang C., Ito Y., Takeda S., Takeya Y., Sugimoto K., Nakagami H., Hanayama R., Rakugi H.
“Novel properties of myoferlin in glucose metabolism via pathways involving modulation of adipose functions”
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“High-Speed SICM for the Visualization of Nanoscale Dynamic Structural Changes in Hippocampal Neurons”
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“The Biogenesis of SRP RNA Is Modulated by an RNA Folding Intermediate Attained during Transcription”
Molecular Cell, 77(2), 241-250
DOI: 10.1016/j.molcel.2019.10.006 - Kisui F., Fukami T., Nakano M., Nakajima M.
“Strain and sex differences in drug hydrolase activities in rodent livers”
European Journal of Pharmaceutical Sciences, 142, 105143
DOI: 10.1016/j.ejps.2019.105143 - Boott C.E., Tran A., Hamad W.Y., MacLachlan M.J.
“Cellulose Nanocrystal Elastomers with Reversible Visible Color”
Angewandte Chemie – International Edition, 59(1), 226-231
DOI: 10.1002/anie.201911468 - Nakano M., Ondo K., Takemoto S., Fukami T., Nakajima M.
“Methylation of adenosine at the N6 position post-transcriptionally regulates hepatic P450s expression”
Biochemical Pharmacology, 171, 113697
DOI: 10.1016/j.bcp.2019.113697 - Shinde N., Furutachi H., Sakata Y., Akine S., Fujinami S., Suzuki M.
“Crystal structure of (μ-phenoxo)bis(μ-pentafluorobenzoate)dicobalt(II, III) complex with a dinucleating ligand”
X-ray Structure Analysis Online, 36, 23-25
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“Computed Atomic Force Microscopy Images of Chromosomes by Calculating Forces with Oscillating Probes”
Journal of Physical Chemistry C, 124(3), 2213-2218
DOI: 10.1021/acs.jpcc.9b10263 - Yamaura Y., Kanki M., Sasaki D., Nakajima M., Unami A.
“Serum MiR-206 as a biomarker for drug-induced skeletal muscle injury in rats”
Journal of Toxicological Sciences, 45(8), 503-513
DOI: 10.2131/jts.45.503 - Dewi F.R.P., Jiapaer S., Kobayashi A., Hazawa M., Ikliptikawati D.K., Hartono, Sabit H., Nakada M., Wong R.W.
“Nucleoporin TPR (translocated promoter region, nuclear basket protein) upregulation alters MTOR-HSF1 trails and suppresses autophagy induction in ependymoma”
Autophagy
DOI: 10.1080/15548627.2020.1741318 - Arai S., Takeuchi S., Fukuda K., Tanimoto A., Nishiyama A., Konishi H., Takagi A., Takahashi H., Ong S.T., Yano S.
“Resminostat, a histone deacetylase inhibitor, circumvents tolerance to EGFR inhibitors in EGFR-mutated lung cancer cells with BIM deletion polymorphism”
Journal of Medical Investigation, 67(3.4), 343-350
DOI: 10.2152/jmi.67.343 - Söngen H., Jaques Y.M., Spijker P., Marutschke C., Klassen S., Hermes I., Bechstein R., Zivanovic L., Tracey J., Foster A.S., Kühnle A.
“Three-dimensional solvation structure of ethanol on carbonate minerals”
Beilstein Journal of Nanotechnology, 11, 74, 891-898
DOI: 10.3762/BJNANO.11.74 - Alova A., Erofeev A., Gorelkin P., Bibikova T., Korchev Y., Majouga A., Bulychev A.
“Prolonged oxygen depletion in microwounded cells of Chara corallina detected with novel oxygen nanosensors”
Journal of experimental botany, 71(1), 386-398
DOI: 10.1093/jxb/erz433 - Kawai S., Krejčí O., Nishiuchi T., Sahara K., Kodama T., Pawlak R., Meyer E., Kubo T., Foster A.S.
“Three-dimensional graphene nanoribbons as a framework for molecular assembly and local probe chemistry”
Science Advances, 6(9), eaay8913
DOI: 10.1126/sciadv.aay8913 - Alldritt B., Hapala P., Oinonen N., Urtev F., Krejci O., Canova F.F., Kannala J., Schulz F., Liljeroth P., Foster A.S.
“Automated structure discovery in atomic force microscopy”
Science Advances, 6(9), eaay6913
DOI: 10.1126/sciadv.aay6913 - Zhou L., Wang D., Sheng D., Xu J., Chen W., Qin Y., Du R., Yang X., He X., Xie N., Liu S., Zhang L.
“NOTCH4 maintains quiescent mesenchymal-like breast cancer stem cells via transcriptionally activating SLUG and GAS1 in triple-negative breast cancer”
Theranostics, 10(5), 2405-2421
DOI: 10.7150/thno.38875 - Blanco-Dorado S., Belles Medall M.D., Pascual-Marmaneu O., Campos-Toimil M., Otero-Espinar F.J., Rodríguez-Riego R., Rodríguez-Jato T., Zarra-Ferro I., Lamas M.J., Fernández-Ferreiro A.
“Therapeutic drug monitoring of voriconazole: Validation of a high performance liquid chromatography method and comparison with an ARK immunoassay”
European Journal of Hospital Pharmacy
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“Short-term angiotensin II treatment regulates cardiac nanomechanics via microtubule modifications”
Nanoscale, 12(30), 16315-16329
DOI: 10.1039/d0nr02474k - Takeuchi S., Hase T., Shimizu S., Ando M., Hata A., Murakami H., Kawakami T., Nagase K., Yoshimura K., Fujiwara T., Tanimoto A., Nishiyama A., Arai S., Fukuda K., Katakami N., Takahashi T., Hasegawa Y., Ko T.K., Ong S.T., Yano S.
“Phase I study of vorinostat with gefitinib in BIM deletion polymorphism/epidermal growth factor receptor mutation double-pnositive lung cancer”
Cancer Science
DOI: 10.1111/cas.14260
Reviews
- Fukuma T.
“Improvements in fundamental performance of in-liquid frequency modulation atomic force microscopy”
Microscopy, 69(6), 340-349
DOI: 10.1093/jmicro/dfaa045 - Sato H., Imamura R., Suga H., Matsumoto K., Sakai K.
“Cyclic peptide-based biologics regulating HGF-MET”
International Journal of Molecular Sciences, 21(21), 7977, 1-15
DOI: 10.1002/adma.201905876 - Tran A., Boott C.E., MacLachlan M.J.
“Understanding the Self-Assembly of Cellulose Nanocrystals—Toward Chiral Photonic Materials”
Advanced Materials, 1905876
DOI: 10.1002/adma.201905876 - Fa S., Yamamoto M., Nishihara H., Nishihara H., Sakamoto R., Kamiya K., Kamiya K., Nishina Y., Ogoshi T., Ogoshi T.
“Carbon-rich materials with three-dimensional ordering at the angstrom level”
Chemical Science, 11(23), 5866-5873
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“High-Speed Atomic Force Microscopy Reveals the Structural Dynamics of the Amyloid-β and Amylin Aggregation Pathways”
International journal of molecular sciences, 21(12)
DOI: 10.3390/ijms21124287 - Akine S., Sakata Y.
“Control of guest binding kinetics in macrocycles and molecular cages”
Chemistry Letters, 49(4), 428-441
DOI: 10.1246/cl.200017 - Loutchko D., Flechsig H.
“Allosteric communication in molecular machines via information exchange: what can be learned from dynamical modeling”
Biophysical Reviews, 12(2), 443-452
DOI: 10.1007/s12551-020-00667-8 - Miyata M., Robinson R.C., Uyeda T.Q.P., Fukumori Y., Fukushima S.-I., Haruta S., Homma M., Inaba K., Ito M., Kaito C., Kato K., Kenri T., Kinosita Y., Kojima S., Minamino T., Mori H., Nakamura S., Nakane D., Nakayama K., Nishiyama M., Shibata S., Shimabukuro K., Tamakoshi M., Taoka A., Tashiro Y., Tulum I., Wada H., Wakabayashi K.-I.
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Genes to Cells, 25(1), 6-21
DOI: 10.1111/gtc.12737
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“Studies on the impellers generating force in muscle”
Biophysical Reviews, 12(4), 767-769
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“High-Speed Atomic Force Microscopy to Study Myosin Motility”
Advances in Experimental Medicine and Biology, 1239, 127-152
DOI: 10.1007/978-3-030-38062-5_7
Note
- Ando T.
“Biophysics in Kanazawa University”
Biophysical Reviews
DOI: 10.1007/s12551-020-00635-2
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“Scanning Ion Conductance Microscopy (SICM) for Low-stress Directly Examining of Cellular Mechanics”
Microscopy and Microanalysis
DOI: 10.1017/S1431927620019972 - Turutin A., Temirov A., Kubasov I., Kislyuk A., Malinkovich M., Parkhomenko Y., Erofeev A., Korchev Y.
“Nanosized Field-effect Transistor Based on Germanium for Next Generation Biosensors in Scanning Ion-conductance Microscopy”
Microscopy and Microanalysis, 634
DOI: 10.1017/S1431927620018772
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