NanoLSI Papers
Articles
- Brouns T., De Keersmaecker H., Konrad S.F., Kodera N., Ando T., Lipfert J., De Feyter S., Vanderlinden W.
“Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy”
ACS Nano, 12(12), 11907-11916
DOI: 10.1021/acsnano.8b06994 - Fukuma T., Garcia R.
“Atomic- and Molecular-Resolution Mapping of Solid-Liquid Interfaces by 3D Atomic Force Microscopy”
ACS Nano, 12(12), 11785-11797
DOI: 10.1021/acsnano.8b07216 - Sakata Y., Yamamoto R., Saito D., Tamura Y., Maruyama K., Ogoshi T., Akine S.
“Metallonanobelt: A Kinetically Stable Shape-Persistent Molecular Belt Prepared by Reversible Self-Assembly Processes”
Inorganic Chemistry, 57(24), 15500-15506
DOI: 10.1021/acs.inorgchem.8b02804 - Ogiso T., Fukami T., Mishiro K., Konishi K., Jones J.P., Nakajima M.
“Substrate selectivity of human aldehyde oxidase 1 in reduction of nitroaromatic drugs”
Archives of Biochemistry and Biophysics, 659, 85-92
DOI: 10.1016/j.abb.2018.10.017 - Ogoshi T., Takashima S., Inada N., Asakawa H., Fukuma T., Shoji Y., Kajitani T., Fukushima T., Tada T., Dotera T., Kakuta T., Yamagishi T.-A.
“Ring shape-dependent self-sorting of pillar[n]arenes assembled on a surface”
Communications Chemistry, 1(1), 92
DOI: 10.1038/s42004-018-0094-z - Miao W., Sakai K., Ozawa N., Nishiuchi T., Suzuki Y., Ito K., Morioka T., Umitsu M., Takagi J., Suga H., Matsumoto K.
“Cellular signaling and gene expression profiles evoked by a bivalent macrocyclic peptide that serves as an artificial MET receptor agonist”
Scientific Reports, 8(1), 16492
DOI: 10.1038/s41598-018-34835-4 - Mori T., Sugiyama S., Byrne M., Johnson C.H., Uchihashi T., Ando T.
“Revealing circadian mechanisms of integration and resilience by visualizing clock proteins working in real time”
Nature Communications, 9(1), 3245
DOI: 10.1038/s41467-018-05438-4 - Sairenji S., Akine S., Nabeshima T.
“Response speed control of helicity inversion based on a “regulatory enzyme”-like strategy”
Scientific Reports, 8(1), 137
DOI: 10.1038/s41598-017-16503-1 - Himanen L., Rinke P., Foster A.S.
“Materials structure genealogy and high-throughput topological classification of surfaces and 2D materials”
npj Computational Materials, 4(1), 52
DOI: 10.1038/s41524-018-0107-6 - Jäger M.O.J., Morooka E.V., Federici Canova F., Himanen L., Foster A.S.
“Machine learning hydrogen adsorption on nanoclusters through structural descriptors”
npj Computational Materials, 4(1), 37
DOI: 10.1038/s41524-018-0096-5 - Li X., Collins L., Miyazawa K., Fukuma T., Jesse S., Kalinin S.V.
“High-veracity functional imaging in scanning probe microscopy via Graph-Bootstrapping”
Nature Communications, 9(1), 2428
DOI: 10.1038/s41467-018-04887-1 - Uchihashi T., Watanabe Y.-H., Nakazaki Y., Yamasaki T., Watanabe H., Maruno T., Ishii K., Uchiyama S., Song C., Murata K., Iino R., Ando T.
“Dynamic structural states of ClpB involved in its disaggregation function”
Nature Communications, 9(1), 2147
DOI: 10.1038/s41467-018-04587-w - Shibata M., Inoue K., Ikeda K., Konno M., Singh M., Kataoka C., Abe-Yoshizumi R., Kandori H., Uchihashi T.
“Oligomeric states of microbial rhodopsins determined by high-speed atomic force microscopy and circular dichroic spectroscopy”
Scientific Reports, 8(1), 8262
DOI: 10.1038/s41598-018-26606-y - Erofeev A., Gorelkin P., Garanina A., Alova A., Efremova M., Vorobyeva N., Edwards C., Korchev Y., Majouga A.
“Novel method for rapid toxicity screening of magnetic nanoparticles”
Scientific Reports, 8(1), 7462
DOI: 10.1038/s41598-018-25852-4 - Molino P.J., Yang D., Penna M., Miyazawa K., Knowles B.R., Maclaughlin S., Fukuma T., Yarovsky I., Higgins M.J.
“Hydration Layer Structure of Biofouling-Resistant Nanoparticles”
ACS Nano, 12(11), 11610-11624
DOI: 10.1021/acsnano.8b06856 - Miyatake Y., Yamano T., Hanayama R.
“Myoferlin-Mediated Lysosomal Exocytosis Regulates Cytotoxicity by Phagocytes”
Journal of Immunology, 201(10), 3051-3057
DOI: 10.4049/jimmunol.1800268 - Morimoto M., Takatsuji Y., Hirata K., Fukuma T., Ohno T., Sakakura T., Haruyama T.
“Visualization of catalytic edge reactivity in electrochemical CO2 reduction on porous Zn electrode”
Electrochimica Acta, 290, 255-261
DOI: 10.1016/j.electacta.2018.09.080 - Ogoshi T., Yamafuji D., Aoki T., Yamagishi T.-a.
“An Electric Trap: Electron-Rich Carbonyl Axis Ends Slow Threading/Dethreading Exchange Dynamics of Pillar[5]arene Ring along Axis”
Israel Journal of Chemistry, 58(11), 1246–1250
DOI: 10.1002/ijch.201800019 - Asakawa H., Holmström E., Foster A.S., Kamimura S., Ohno T., Fukuma T.
“Direct Imaging of Atomic-Scale Surface Structures of Brookite TiO2 Nanoparticles by Frequency Modulation Atomic Force Microscopy in Liquid”
Journal of Physical Chemistry C, 122(42), 24085-24093
DOI: 10.1021/acs.jpcc.8b06262 - Miao W., Sakai K., Imamura R., Ito K., Suga H., Sakuma T., Yamamoto T., Matsumoto K.
“MET Activation by a Macrocyclic Peptide Agonist that Couples to Biological Responses Differently from HGF in a Context-Dependent Manner”
International journal of molecular sciences, 19(10), 3141
DOI: 10.3390/ijms19103141 - Matsumae Y., Takahashi Y., Shiku H., Matsue T.
“Quantitative Real-Time Monitoring of Antibody-Induced Internalization of Epidermal Growth Factor Receptor on Single Living Mammalian Cells Using Scanning Electrochemical Microscopy”
ChemElectroChem, 5(20), 3096-3101
DOI: 10.1002/celc.201800563 - Mizuno K., Takeuchi K., Umehara K., Nakajima M.
“Identification of a novel metabolite of vildagliptin in humans: Cysteine targets the nitrile moiety to form a thiazoline ring”
Biochemical Pharmacology, 156, 312-321
DOI: 10.1016/j.bcp.2018.08.043 - Song N., Kakuta T., Yamagishi T.-A., Yang Y.-W., Ogoshi T.
“Molecular-Scale Porous Materials Based on Pillar[n]arenes”
Chem, 4(9), 2029-2053
DOI: 10.1016/j.chempr.2018.05.015 - Kumar A., Banerjee K., Foster A.S., Liljeroth P.
“Two-Dimensional Band Structure in Honeycomb Metal-Organic Frameworks”
Nano Letters, 18(9), 5596-5602
DOI: 10.1021/acs.nanolett.8b02062 - Zaidan M.A., Haapasilta V., Relan R., Paasonen P., Kerminen V.-M., Junninen H., Kulmala M., Foster A.S.
“Exploring non-linear associations between atmospheric new-particle formation and ambient variables: A mutual information approach”
Atmospheric Chemistry and Physics, 18(17), 12699-12714
DOI: 10.5194/acp-18-12699-2018 - Konishi K., Fukami T., Ogiso T., Nakajima M.
“In vitro approach to elucidate the relevance of carboxylesterase 2 and N-acetyltransferase 2 to flupirtine-induced liver injury”
Biochemical Pharmacology, 155, 242-251
DOI: 10.1016/j.bcp.2018.07.019 - Kawai S., Krejčí O., Foster A.S., Pawlak R., Xu F., Peng L., Orita A., Meyer E.
“Diacetylene linked anthracene oligomers synthesized by one-shot homocoupling of trimethylsilyl on Cu(111)”
ACS Nano, 12(8), 8791-8797
DOI: 10.1021/acsnano.8b05116 - Hirata K., Kitagawa T., Miyazawa K., Okamoto T., Fukunaga A., Takatoh C., Fukuma T.
“Visualizing charges accumulated in an electric double layer by three-dimensional open-loop electric potential microscopy”
Nanoscale, 10(30), 14736-14746
DOI: 10.1039/c8nr03600d - Umeda K., Kobayashi K., Minato T., Yamada H.
“Atomic-Scale 3D Local Hydration Structures Influenced by Water-Restricting Dimensions”
Langmuir, 34(31), 9114-9121
DOI: 10.1021/acs.langmuir.8b01340 - Tatsumi N., Tokumitsu S., Nakano M., Fukami T., Nakajima M.
“miR-141-3p commonly regulates human UGT1A isoforms via different mechanisms”
Drug Metabolism and Pharmacokinetics, 33(4), 203-210
DOI: 10.1016/j.dmpk.2018.05.002 - Vu H.T., Kobayashi M., Hegazy A.M., Tadokoro Y., Ueno M., Kasahara A., Takase Y., Nomura N., Peng H., Ito C., Ino Y., Todo T., Nakada M., Hirao A.
“Autophagy inhibition synergizes with calcium mobilization to achieve efficient therapy of malignant gliomas”
Cancer Science, 109(8), 2497-2508
DOI: 10.1111/cas.13695 - Ogoshi T., Akutsu T., Yamagishi T.-A.
“An amphiphilic pseudo[1]catenane: Neutral guest-induced clouding point change”
Beilstein Journal of Organic Chemistry, 14, 1937-1943
DOI: 10.3762/bjoc.14.167 - Shimoi M., Watanabe T., Maeda K., Curran D.P., Taniguchi T.
“Radical trans-Hydroboration of Alkynes with N-Heterocyclic Carbene Boranes”
Angewandte Chemie – International Edition, 57(30), 9485-9490
DOI: 10.1002/anie.201804515 - Kakuta T., Yamagishi T.-A., Ogoshi T.
“Stimuli-Responsive Supramolecular Assemblies Constructed from Pillar[n]arenes”
Accounts of Chemical Research, 51(7), 1656-1666
DOI: 10.1021/acs.accounts.8b00157 - Umakoshi T., Udaka H., Uchihashi T., Ando T., Suzuki M., Fukuda T.
“Quantum-dot antibody conjugation visualized at the single-molecule scale with high-speed atomic force microscopy”
Colloids and Surfaces B: Biointerfaces, 167, 267-274
DOI: 10.1016/j.colsurfb.2018.04.015 - Hirose D., Nozaki S., Kanoh S., Maeda K.
“Synthesis of amphiphilic block copolymers containing chiral polythiophene chains and their micelle formation and chiroptical properties”
Polymers, 10(7), 718
DOI: 10.3390/polym10070718 - Li R., Gunarta I.K., Suzuki R., Boldbaatar J., Nakazato R., Yuliana D., Davaakhuu G., Oyunsuren T., Takamatsu N., Kobayashi M., Hirao A., Yoshioka K.
“JLP-JNK signaling protects cancer cells from reactive oxygen species-induced cell death”
Biochemical and Biophysical Research Communications, 501(3), 724-730
DOI: 10.1016/j.bbrc.2018.05.055 - Schulz F., Ritala J., Krejčí O., Seitsonen A.P., Foster A.S., Liljeroth P.
“Elemental Identification by Combining Atomic Force Microscopy and Kelvin Probe Force Microscopy”
ACS Nano, 12(6), 5274-5283
DOI: 10.1021/acsnano.7b08997 - Noshiro D., Ando T.
“Substrate protein dependence of GroEL–GroES interaction cycle revealed by high-speed atomic force microscopy imaging”
Philosophical Transactions of the Royal Society B: Biological Sciences, 373(1749), 20170180
DOI: 10.1098/rstb.2017.0180 - Kakimoto Y., Tachihara Y., Okamoto Y., Miyazawa K., Fukuma T., Tero R.
“Morphology and Physical Properties of Hydrophilic-Polymer-Modified Lipids in Supported Lipid Bilayers”
Langmuir, 34(24), 7201-7209
DOI: 10.1021/acs.langmuir.8b00870 - Jie K., Liu M., Zhou Y., Little M.A., Pulido A., Chong S.Y., Stephenson A., Hughes A.R., Sakakibara F., Ogoshi T., Blanc F., Day G.M., Huang F., Cooper A.I.
“Near-Ideal Xylene Selectivity in Adaptive Molecular Pillar[ n]arene Crystals”
Journal of the American Chemical Society, 140(22), 6921-6930
DOI: 10.1021/jacs.8b02621 - Ravula T., Ishikuro D., Kodera N., Ando T., Anantharamaiah G.M., Ramamoorthy A.
“Real-Time Monitoring of Lipid Exchange via Fusion of Peptide Based Lipid-Nanodiscs”
Chemistry of Materials, 30(10), 3204-3207
DOI: 10.1021/acs.chemmater.8b00946 - Tadokoro Y., Hoshii T., Yamazaki S., Eto K., Ema H., Kobayashi M., Ueno M., Ohta K., Arai Y., Hara E., Harada K., Oshima M., Oshima H., Arai F., Yoshimura A., Nakauchi H., Hirao A.
“Spred1 Safeguards Hematopoietic Homeostasis against Diet-Induced Systemic Stress”
Cell Stem Cell, 22(5), 713-725.e8
DOI: 10.1016/j.stem.2018.04.002 - Amano T., Fukami T., Ogiso T., Hirose D., Jones J.P., Taniguchi T., Nakajima M.
“Identification of enzymes responsible for dantrolene metabolism in the human liver: A clue to uncover the cause of liver injury”
Biochemical Pharmacology, 151, 69-78
DOI: 10.1016/j.bcp.2018.03.002 - Kakuchi R., Yoshida S., Sasaki T., Kanoh S., Maeda K.
“Multi-component post-polymerization modification reactions of polymers featuring lignin-model compounds”
Polymer Chemistry, 9(16), 2109-2115
DOI: 10.1039/c7py01923h - Ogoshi T., Kotera D., Nishida S., Kakuta T., Yamagishi T.-A., Brouwer A.M.
“Spacer Length-Independent Shuttling of the Pillar[5]arene Ring in Neutral [2]Rotaxanes”
Chemistry – A European Journal, 24(24), 6325-6329
DOI: 10.1002/chem.201800104 - Ogoshi T., Tsuchida H., Kakuta T., Yamagishi T.-A., Taema A., Ono T., Sugimoto M., Mizuno M.
“Ultralong Room-Temperature Phosphorescence from Amorphous Polymer Poly(Styrene Sulfonic Acid) in Air in the Dry Solid State”
Advanced Functional Materials, 28(16), 1707369
DOI: 10.1002/adfm.201707369 - Kawai S., Nakatsuka S., Hatakeyama T., Pawlak R., Meier T., Tracey J., Meyer E., Foster A.S.
“Multiple heteroatom substitution to graphene nanoribbon”
Science Advances, 4(4), eaar7181
DOI: 10.1126/sciadv.aar7181 - Söngen H., Reischl B., Miyata K., Bechstein R., Raiteri P., Rohl A.L., Gale J.D., Fukuma T., Kühnle A.
“Resolving Point Defects in the Hydration Structure of Calcite (10.4) with Three-Dimensional Atomic Force Microscopy”
Physical Review Letters, 120(11), 116101
DOI: 10.1103/PhysRevLett.120.116101 - Maeda K., Hirose D., Okoshi N., Shimomura K., Wada Y., Ikai T., Kanoh S., Yashima E.
“Direct Detection of Hardly Detectable Hidden Chirality of Hydrocarbons and Deuterated Isotopomers by a Helical Polyacetylene through Chiral Amplification and Memory”
Journal of the American Chemical Society, 140(9), 3270-3276
DOI: 10.1021/jacs.7b10981 - Sakai E., Nakayama M., Oshima H., Kouyama Y., Niida A., Fujii S., Ochiai A., Nakayama K.I., Mimori K., Suzuki Y., Hong C.P., Ock C.-Y., Kim S.-J., Oshima M.
“Combined mutation of Apc, Kras, and Tgfbr2 effectively drives metastasis of intestinal cancer”
Cancer Research, 78(5), 1334-1346
DOI: 10.1158/0008-5472.CAN-17-3303 - Zhou Y., Saito M., Miyamoto T., Novak P., Shevchuk A.I., Korchev Y.E., Fukuma T., Takahashi Y.
“Nanoscale Imaging of Primary Cilia with Scanning Ion Conductance Microscopy”
Analytical Chemistry, 90(4), 2891-2895
DOI: 10.1021/acs.analchem.7b05112 - Ogoshi T., Saito K., Sueto R., Kojima R., Hamada Y., Akine S., Moeljadi A.M.P., Hirao H., Kakuta T., Yamagishi T.-A.
“Separation of Linear and Branched Alkanes Using Host–Guest Complexation of Cyclic and Branched Alkane Vapors by Crystal State Pillar[6]arene”
Angewandte Chemie – International Edition, 57(6), 1592-1595
DOI: 10.1002/anie.201711575 - Ogoshi T., Takashima S., Yamagishi T.-A.
“Photocontrolled Reversible Guest Uptake, Storage, and Release by Azobenzene-Modified Microporous Multilayer Films of Pillar[5]arenes”
Journal of the American Chemical Society, 140(4), 1544-1548
DOI:10.1021/jacs.7b12893 - Ogoshi T., Furuta T., Hamada Y., Kakuta T., Yamagishi T.
“Solid-state self-inclusion complexation behaviour of a pillar[5]arene-based host-guest conjugate”
Materials Chemistry Frontiers, 2(3), 597-602
DOI: 10.1039/c7qm00553a - Sasai Y., Tsuchida H., Kakuta T., Ogoshi T., Morisaki Y.
“Synthesis of optically active π-stacked compounds based on planar chiral tetrasubstituted [2.2]paracyclophane”
Materials Chemistry Frontiers, 2(4), 791-795
DOI: 10.1039/c7qm00613f - Miyata K., Fukuma T.
“Quantitative comparison of wideband low-latency phase-locked loop circuit designs for high-speed frequency modulation atomic force microscopy”
Beilstein Journal of Nanotechnology, 9(1), 1844-1855
DOI: 10.3762/bjnano.9.176 - Uno M., Watanabe-Nakayama T., Konno H., Akagi K.-I., Tsutsumi N., Fukao T., Shirakawa M., Ohnishi H., Tochio H.
“Intramolecular interaction suggests an autosuppression mechanism for the innate immune adaptor protein MyD88”
Chemical communications, 54(87), 12318-12321
DOI: 10.1039/c8cc06480f - Peng H., Kasada A., Ueno M., Hoshii T., Tadokoro Y., Nomura N., Ito C., Takase Y., Vu H.T., Kobayashi M., Xiao B., Worley P.F., Hirao A.
“Distinct roles of Rheb and Raptor in activating mTOR complex 1 for the self-renewal of hematopoietic stem cells”
Biochemical and Biophysical Research Communications, 495(1), 1129-1135
DOI: 10.1016/j.bbrc.2017.11.140 - Yang C.-W., Miyazawa K., Fukuma T., Miyata K., Hwang I.-S.
“Direct comparison between subnanometer hydration structures on hydrophilic and hydrophobic surfaces via three-dimensional scanning force microscopy”
Physical Chemistry Chemical Physics, 20(36), 23522-23527
DOI: 10.1039/c8cp02309c - Dewi F.R.P., Domoto T., Hazawa M., Kobayashi A., Douwaki T., Minamoto T., Wong R.W.
“Colorectal cancer cells require glycogen synthase kinase-3β for sustaining mitosis via translocated promoter region (TPR)- dynein interaction”
Oncotarget, 9(17), 13337-13352
DOI: 10.18632/oncotarget.24344 - Hazawa M., Lin D.-C., Kobayashi A., Jiang Y.-Y., Xu L., Dewi F.R.P., Mohamed M.S., Hartono, Nakada M., Meguro-Horike M., Horike S.-I., Koeffler H.P., Wong R.W.
“ROCK-dependent phosphorylation of NUP62 regulates p63 nuclear transport and squamous cell carcinoma proliferation”
EMBO Reports, 19(1), 73-88
DOI: 10.15252/embr.201744523 - Akine S., Onuma T., Nabeshima T.
“A novel graphite-like stacking structure in a discrete molecule and its molecular recognition behavior”
New Journal of Chemistry, 42(12), 9369-9372
DOI: 10.1039/c8nj01315b - Nagata Y., Shimada Y., Nishikawa T., Takeda R., Uno M., Ogoshi T., Suginome M.
“A Planar-Chiral Pillar[5]arene-Based Monophosphine Ligand with Induced Chirality at the Biaryl Axis”
Synlett, 29(16), 2167-2170
DOI: 10.1055/s-0037-1610635 - Vaneev A.N., Alova A.V., Erofeev A.S., Gorelkin P.V., Aleksashkin A.D., Beznos O.V., Chesnokova N.B., Kost O.A., Majouga A.M., Korchev Y., Klyachko N.L.
“Detecting reactive oxygen species in biological fluids by platinum nanoelectrode applying amperometric method”
Bulletin of Russian State Medical University, 7(6), 144-149
DOI: 10.24075/brsmu.2018.045 - Zaidan M.A., Haapasilta V., Relan R., Junninen H., Aalto P.P., Kulmala M., Laurson L., Foster A.S.
“Predicting atmospheric particle formation days by Bayesian classification of the time series features”
Tellus, Series B: Chemical and Physical Meteorology, 70(1), 1530031
DOI: 10.1080/16000889.2018.1530031
Reviews
- Togashi Y., Flechsig H.
“Coarse-grained protein dynamics studies using elastic network models”
International Journal of Molecular Sciences, 19(12), 3899
DOI: 10.3390/ijms19123899 - Flechsig H., Togashi Y.
“Designed elastic networks: Models of complex protein machinery”
International Journal of Molecular Sciences, 19(10), 3152
DOI: 10.3390/ijms19103152 - Akine S.
“Dynamic helicity control of oligo(salamo)-based metal helicates”
Inorganics, 6(3), 80
DOI: 10.3390/inorganics6030080 - Ando T., Bhamidimarri S.P., Brending N., Colin-York H., Collinson L., De Jonge N., De Pablo P.J., Debroye E., Eggeling C., Franck C., Fritzsche M., Gerritsen H., Giepmans B.N.G., Grunewald K., Hofkens J., Hoogenboom J.P., Janssen K.P.F., Kaufman R., Klumpermann J., Kurniawan N., Kusch J., Liv N., Parekh V., Peckys D.B., Rehfeldt F., Reutens D.C., Roeffaers M.B.J., Salditt T., Schaap I.A.T., Schwarz U.S., Verkade P., Vogel M.W., Wagner R., Winterhalter M., Yuan H., Zifarelli G.
“The 2018 correlative microscopy techniques roadmap”
Journal of Physics D: Applied Physics, 51(44), 443001
DOI: 10.1088/1361-6463/aad055 - Katayama E., Kodera N.
“Unconventional imaging methods to capture transient structures during actomyosin interaction”
International Journal of Molecular Sciences, 19(5), 1402
DOI: 10.3390/ijms19051402 - Nakano M., Nakajima M.
“Current knowledge of microRNA-mediated regulation of drug metabolism in humans”
Expert Opinion on Drug Metabolism and Toxicology, 14(5), 493-504
DOI: 10.1080/17425255.2018.1472237 - Echizen K., Oshima H., Nakayama M., Oshima M.
“The inflammatory microenvironment that promotes gastrointestinal cancer development and invasion”
Advances in Biological Regulation, 68, 39-45
DOI: 10.1016/j.jbior.2018.02.001 - Ando T.
“High-speed atomic force microscopy and its future prospects”
Biophysical Reviews, 10(2), 285-292
DOI: 10.1007/s12551-017-0356-5 - Kawahara H., Hanayama R.
“The role of exosomes/extracellular vesicles in neural signal transduction”
Biological and Pharmaceutical Bulletin, 41(8), 1119-1125
DOI: 10.1248/bpb.b18-00167
Letter
- Hirano T., Konno H., Takeda S., Dolan L., Kato M., Aoyama T., Higaki T., Takigawa-Imamura H., Sato M.H.
“PtdIns(3,5)P2 mediates root hair shank hardening in Arabidopsis”
Nature Plants, 4(11), 888-897
DOI: 10.1038/s41477-018-0277-8
Book Chapter
- Ogoshi T., Kakuta T., Yamagishi T.-A.
“Molecular space chemistry based on pillar[n]arenes”
Designed Molecular Space in Material Science and Catalysis, 33-49
DOI: 10.1007/978-981-13-1256-4_2 - Kodera N., Ando T.
“Direct imaging of walking myosin V by high-speed atomic force microscopy”
Methods in Molecular Biology, 1805, 103-122
DOI: 10.1007/978-1-4939-8556-2_6 - Watanabe-Nakayama T., Ono K.
“High-speed atomic force microscopy of individual amyloidogenic protein assemblies”
Methods in Molecular Biology, 1814, 201-212
DOI: 10.1007/978-1-4939-8591-3_12 - Hazawa M., Kobayashi A., Wong R.W.
“NPCs in mitosis and chromosome segregation”
Nuclear Pore Complexes in Genome Organization, Function and Maintenance, 219-240
DOI: 10.1007/978-3-319-71614-5_10 - Uchihashi T., Watanabe H., Kodera N.
“Optimum substrates for imaging biological molecules with high-speed atomic force microscopy”
Methods in Molecular Biology, 1814, 159-179
DOI: 10.1007/978-1-4939-8591-3_10
Conference Paper
- Mizuno K., Sumikama T., Tarnai Y., Tani M.
“Origins of Heat Evolution in Mixing Water and Dimethyl Sulfoxide”
International Conference on Infrared, Millimeter, and Terahertz Waves, IRMMW-THz, 2018-September, 8509894
DOI: 10.1109/IRMMW-THz.2018.8509894 - Umakoshi T., Fukuda S., Uchihashi T., Verma P., Ando T.
“High-speed scanning near-field optical microscopy”
Optics InfoBase Conference Papers, Part F125-JSAP 2018
DOI: N/A
Short Survey
- Lim K.S., Wong R.W.
“Targeting Nucleoporin POM121-Importin β Axis in Prostate Cancer”
Cell Chemical Biology, 25(9), 1056-1058
DOI: 10.1016/j.chembiol.2018.09.003
NanoLSI Related Papers
Articles
- Ikai T., Minami S., Awata S., Shimizu S., Yoshida T., Okubo M., Shinohara K.-I.
“Helicity control of π-conjugated foldamers containing d-glucose-based single enantiomeric units as a chiral source”
Polymer Chemistry, 9(46), 5504-5510
DOI: 10.1039/c8py01436a - Tanimoto A., Takeuchi S., Kotani H., Yamashita K., Yamada T., Ohtsubo K., Ebi H., Ikeda H., Yano S.
“Pulmonary carcinosarcoma showing an obvious response to pazopanib: A case report”
BMC Pulmonary Medicine, 18(1), 193
DOI: 10.1186/s12890-018-0757-7 - Ohtsuka J., Oshima H., Ezawa I., Abe R., Oshima M., Ohki R.
“Functional loss of p53 cooperates with the in vivo microenvironment to promote malignant progression of gastric cancers”
Scientific Reports, 8(1), 2291
DOI: 10.1038/s41598-018-20572-1 - Arasada R.R., Shilo K., Yamada T., Zhang J., Yano S., Ghanem R., Wang W., Takeuchi S., Fukuda K., Katakami N., Tomii K., Ogushi F., Nishioka Y., Talabere T., Misra S., Duan W., Fadda P., Rahman M.A., Nana-Sinkam P., Evans J., Amann J., Tchekneva E.E., Dikov M.M., Carbone D.P.
“Notch3-dependent β-catenin signaling mediates EGFR TKI drug persistence in EGFR mutant NSCLC”
Nature Communications, 9(1), 3198
DOI: 10.1038/s41467-018-05626-2 - Kang M.-H., Choi H., Oshima M., Cheong J.-H., Kim S., Lee J.H., Park Y.S., Choi H.-S., Kweon M.-N., Pack C.-G., Lee J.-S., Mills G.B., Myung S.-J., Park Y.-Y.
“Estrogen-related receptor gamma functions as a tumor suppressor in gastric cancer”
Nature Communications, 9(1), 1920
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“Co-activation of super-enhancer-driven CCAT1 by TP63 and SOX2 promotes squamous cancer progression”
Nature Communications, 9(1), 3619
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“Gated Single-Molecule Transport in Double-Barreled Nanopores”
ACS Applied Materials and Interfaces, 10(44), 38621-38629
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“Dietary intake of pyrolyzed deketene curcumin inhibits gastric carcinogenesis”
Journal of Functional Foods, 50, 192-200
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“Stable and sensitive stimuli-responsive anisotropic hydrogels for sensing ionic strength and pressure”
Materials Horizons, 5(6), 1076-1081
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“Butylated lignin as a compatibilizing agent for polypropylene-based carbon fiber-reinforced plastics”
Polymer Journal, 50(10), 997-1002
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“Synthesis of Sterically Fixed Phytochrome Chromophore Derivatives Bearing a 15 E- Fixed or 15 E- Anti-Fixed CD-Ring Component”
Journal of Organic Chemistry, 83(18), 10743-10748
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“Broadband Circular Polarizing Film Based on Chiral Nematic Liquid Crystals”
Advanced Optical Materials, 6(17), 1800412
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Journal of Surfactants and Detergents, 21(5), 733-744
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“Aerogel templating on functionalized fibers of nanocellulose networks”
Materials Chemistry Frontiers, 2(9), 1655-1663
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“Granulocyte-macrophage colony-stimulating factor receptor expression in clinical pain disorder tissues and role in neuronal sensitization”
Pain Reports, 3(5), e676
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“Involvement of p38MAPK in Impaired Neutrophil Bactericidal Activity of Hemodialysis Patients”
Therapeutic Apheresis and Dialysis, 22(4), 345-354
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“Fabrication of cellulose nanocrystal films through differential evaporation for patterned coatings”
ACS Applied Nano Materials, 1(7), 3098-3104
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“High Thermal Stability of Oligomeric Assemblies of Thermophilic Rhodopsin in a Lipid Environment”
Journal of Physical Chemistry B, 122(27), 6945-6953
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“Mesoporous Cobalt Tungsten Oxide Heterostructured Nanotoroids for Gas Sensing”
Advanced Materials Interfaces, 5(13), 1800269
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“Iridescent Chiral Nematic Mesoporous Organosilicas with Alkylene Spacers”
Advanced Optical Materials, 6(13), 1800163
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“Hyperactive gp130/STAT3-driven gastric tumourigenesis promotes submucosal tertiary lymphoid structure development”
International Journal of Cancer, 143(1), 167-178
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“Hydrogen-Bonded Liquid Crystals in Confined Spaces—Toward Photonic Hybrid Materials”
Advanced Functional Materials, 28(26), 1800207
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“Selective Removal of B800 Bacteriochlorophyll a from Light-Harvesting Complex 2 of the Purple Photosynthetic Bacterium Phaeospirillum molischianum”
Biochemistry, 57(21), 3075-303
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“Self-Assembling Supramolecular Nanostructures Constructed from de Novo Extender Protein Nanobuilding Blocks”
ACS Synthetic Biology, 7(5), 1381-1394
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“Foretinib overcomes entrectinib resistance associated with the ntrk1 g667c mutation in ntrk1 fusion–positive tumor cells in a brain metastasis model”
Clinical Cancer Research, 24(10), 2357-2369
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“Electronic conductivity of solid and liquid (Mg, Fe)O computed from first principles”
Earth and Planetary Science Letters, 490, 11-19
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“Glucagon-like peptide 1 receptor (GLP-1R) expression by nerve fibres in inflammatory bowel disease and functional effects in cultured neurons”
PloS one, 13(5), e0198024
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“Insight into structural remodeling of the FlhA ring responsible for bacterial flagellar type III protein export”
Science Advances, 4(4), eaao7054
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“Adiponectin/T-cadherin system enhances exosome biogenesis and decreases cellular ceramides by exosomal release”
JCI insight, 3(8), e99680
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“Synthesis of a helical π-conjugated polymer with a dynamic hydrogen-bonded network in the helical cavity and its circularly polarized luminescence properties”
Polymer Chemistry, 9(13), 1541-1546
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“Coordination Polymers from Functionalized Bipyrimidine Ligands and Silver(I) Salts”
Crystal Growth and Design, 18(4), 2210-2216
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“Chiral Amplification in π-Conjugated Helical Polymers with Circularly Polarized Luminescence”
Macromolecules, 51(6), 2328-2334
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“Circular Polarized Luminescence of Hydrogen-Bonded Molecular Assemblies of Chiral Pyrene Derivatives”
Journal of Physical Chemistry C, 122(11), 6323-6331
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“Circularly Polarized Luminescent Triptycene-Based Polymers”
ACS Macro Letters, 7(3), 364-369
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“Controlling Ligand Exchange through Macrocyclization”
Inorganic Chemistry, 57(6), 3243-3253
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“Size-Selective Exclusion Effects of Liquid Crystalline Tactoids on Nanoparticles: A Separation Method”
Angewandte Chemie – International Edition, 57(13), 3360-3365
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“Clinical utility of a STAT3-regulated miRNA-200 family signature with prognostic potential in early gastric cancer”
Clinical Cancer Research, 24(6), 1459-1472
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“Biotemplated Lightweight γ-Alumina Aerogels”
Chemistry of Materials, 30(5), 1602-1609
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“Negatively Charged Lipids Are Essential for Functional and Structural Switch of Human 2-Cys Peroxiredoxin II”
Journal of Molecular Biology, 430(5), 602-610
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“Inflammasome adaptor ASC suppresses apoptosis of gastric cancer cells by an IL18-mediated inflammation-independent mechanism”
Cancer Research, 78(5), 1293-1307
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“Stemness is enhanced in gastric cancer by a SET/PP2A/E2F1 axis”
Molecular Cancer Research, 16(3), 554-563
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“Alkylated alkali lignin for compatibilizing agents of carbon fiber-reinforced plastics with polypropylene”
Polymer Journal, 50(3), 281-284
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“Distinct dependencies on receptor tyrosine kinases in the regulation of MAPK signaling between BRAF V600E and non-V600E mutant lung cancers”
Oncogene, 37(13), 1775-1787
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“Novel function of HATs and HDACs in homologous recombination through acetylation of human RAD52 at double-strand break sites”
PLoS Genetics, 14(3), e1007277
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“Aerogel materials with periodic structures imprinted with cellulose nanocrystals”
Nanoscale, 10(8), 3805-3812
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“Ubiquitin chain specificities of E6AP E3 ligase and its HECT domain”
Biochemical and Biophysical Research Communications, 496(2), 686-692
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“What can predict and prevent the long-term use of benzodiazepines?”
Journal of Psychiatric Research, 97, 94-100
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“Lipid-Controlled Stabilization of Charge-Separated States (P+QB -) and Photocurrent Generation Activity of a Light-Harvesting-Reaction Center Core Complex (LH1-RC) from Rhodopseudomonas palustris”
Journal of Physical Chemistry B, 122(3), 1066-1080
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“Dynamic clustering of dynamin-amphiphysin helices regulates membrane constriction and fission coupled with GTP hydrolysis”
eLife, 7, e30246
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“CO2-Switchable Cellulose Nanocrystal Hydrogels”
Chemistry of Materials, 30(2), 376-385
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“Tactoid Annealing Improves Order in Self-Assembled Cellulose Nanocrystal Films with Chiral Nematic Structures”
Langmuir, 34(2), 646-652
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“Mesoporous Silica-Supported Nanostructured PdO/CeO2 Catalysts for Low-Temperature Methane Oxidation”
ACS Applied Materials and Interfaces, 10(1), 477-487
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“Difference in substrate specificity of carboxylesterase and arylacetamide deacetylase between dogs and humans”
European Journal of Pharmaceutical Sciences, 111, 167-176
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“Aggregation and ph responsive behavior of thioester surfactants and formation of disulfide linkages in aqueous solutions”
Journal of Oleo Science, 67(2), 199-206
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“Aggregation behavior and thiol-thioester exchange for cationic surfactants with propylthioacetate side chain”
Journal of Oleo Science, 67(8), 969-976
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“Foretinib circumvents the NTRK1 G667C mutation-associated entrectinib-resistance in the brain and liver metastases produced by NTRK1 fusion-positive tumor cells”
Annals of oncology, 29, viii653
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“Optically active distorted cyclic triptycenes: Chiral stationary phases for HPLC”
RSC Advances, 8(37), 20483-20487
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“Synthesis of optically active polymers containing carbohydrate units as a chiral source and exploration of their functions”
Kobunshi Ronbunshu, 75(5), 406-420
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“Measuring magnetosomal pH of the magnetotactic bacterium Magnetospirillum magneticum AMB-1 using pH-sensitive fluorescent proteins”
Bioscience, Biotechnology and Biochemistry, 82(7), 1243-1251
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“Population pharmacokinetic modeling and simulation of afloqualone to predict steady-state exposure levels”
International Journal of Pharmacology, 14(2), 276-284
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“Expanded campestarene hosts for tetra- and dinuclear uranyl(VI) complexes”
Chemical Communications, 54(84), 11869-11872
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“Histone deacetylase inhibition enhances the antitumor activity of a MEK inhibitor in lung cancer cells harboring RAS mutations”
Molecular Cancer Therapeutics, 17(1), 17-25
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“A porous triptycene-based covalent polymer stabilized binary metal sulfide for enhanced hydrogen evolution under visible light”
Chemical Communications, 54(27), 3391-3394
DOI: 10.1039/c8cc00665b
Reviews
- Wang P.-X., MacLachlan M.J.
“Liquid crystalline tactoids: Ordered structure, defective coalescence and evolution in confined geometries”
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 376(2112), 20170042
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“Significance of A-to-I RNA editing of transcripts modulating pharmacokinetics and pharmacodynamics”
Pharmacology and Therapeutics, 181, 13-21
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“Atomic force microscope as a nano- and micrometer scale biological manipulator: A short review”
Seminars in Cell and Developmental Biology, 73, 132-144
DOI: 10.1016/j.semcdb.2017.07.031
Letter
- Cao D., Jiang J., Zhao D., Wu M., Zhang H., Zhou T., Tsukamoto T., Oshima M., Wang Q., Cao X.
“The protective effects of 18β-glycyrrhetinic acid against inflammation microenvironment in gastric tumorigenesis targeting PGE2-EP2 receptor-mediated arachidonic acid pathway”
European Journal of Inflammation, 16
DOI: 10.1177/2058739218762993
Book Chapter
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“Uni-directional propagation of structural changes in actin filaments”
The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery, 157-177
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“Ion conductance probe microscopy-molecular resolution”
Encyclopedia of Interfacial Chemistry: Surface Science and Electrochemistry, 295-303
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“Laser microdissection of cellular compartments for expression analyses in cancer models”
Methods in Molecular Biology, 1725, 143-153
DOI: 10.1007/978-1-4939-7568-6_12
Note
- MacLachlan M.J.
“Bringing Nanotubes into Line”
Angewandte Chemie – International Edition, 57(18), 4838-4839
DOI: 10.1002/anie.201801871
JP